Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx6Q8C7R7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx6Q8C7R7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx6Q8C7R7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.38■□□□□ 0.53
Rfx6Q8C7R7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx6Q8C7R7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx6Q8C7R7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx6Q8C7R7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx6Q8C7R7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx6Q8C7R7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx6Q8C7R7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rfx6Q8C7R7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx6Q8C7R7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx6Q8C7R7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx6Q8C7R7 Gm13534-201ENSMUST00000121169 513 ntBASIC18.35■□□□□ 0.53
Rfx6Q8C7R7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rfx6Q8C7R7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx6Q8C7R7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx6Q8C7R7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Tgds-204ENSMUST00000228543 1594 ntBASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rfx6Q8C7R7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rfx6Q8C7R7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx6Q8C7R7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx6Q8C7R7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rfx6Q8C7R7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx6Q8C7R7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx6Q8C7R7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rfx6Q8C7R7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx6Q8C7R7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx6Q8C7R7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx6Q8C7R7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx6Q8C7R7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx6Q8C7R7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx6Q8C7R7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx6Q8C7R7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rfx6Q8C7R7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfx6Q8C7R7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.33■□□□□ 0.52
Rfx6Q8C7R7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfx6Q8C7R7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms