Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.29■□□□□ 0.2
Col6a6Q8C6K9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 Gm25016-201ENSMUST00000158399 131 ntBASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Col6a6Q8C6K9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Gm5587-201ENSMUST00000206270 674 ntBASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col6a6Q8C6K9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Col6a6Q8C6K9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Col6a6Q8C6K9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col6a6Q8C6K9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Col6a6Q8C6K9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Gm9103-201ENSMUST00000119371 405 ntBASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Gm18101-201ENSMUST00000215769 548 ntBASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Col6a6Q8C6K9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Gm27463-201ENSMUST00000183569 57 ntBASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col6a6Q8C6K9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a6Q8C6K9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms