Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Gm12251-201ENSMUST00000117893 792 ntBASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tsen54Q8C2A2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tsen54Q8C2A2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Gm43173-201ENSMUST00000202246 593 ntBASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tsen54Q8C2A2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tsen54Q8C2A2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tsen54Q8C2A2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Tsen54Q8C2A2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
Tsen54Q8C2A2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tsen54Q8C2A2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.08■□□□□ 0.01
Tsen54Q8C2A2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Tsen54Q8C2A2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tsen54Q8C2A2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tsen54Q8C2A2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tsen54Q8C2A2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tsen54Q8C2A2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Tsen54Q8C2A2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms