Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps9d1Q8C190 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps9d1Q8C190 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vps9d1Q8C190 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps9d1Q8C190 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps9d1Q8C190 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps9d1Q8C190 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps9d1Q8C190 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps9d1Q8C190 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps9d1Q8C190 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps9d1Q8C190 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.9■□□□□ 0.3
Vps9d1Q8C190 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.9■□□□□ 0.3
Vps9d1Q8C190 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.9■□□□□ 0.3
Vps9d1Q8C190 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps9d1Q8C190 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Vps9d1Q8C190 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps9d1Q8C190 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Gm26571-201ENSMUST00000181399 666 ntBASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps9d1Q8C190 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vps9d1Q8C190 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Gm7291-201ENSMUST00000199147 382 ntBASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Gm42569-201ENSMUST00000200539 472 ntBASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Gm42642-201ENSMUST00000200683 355 ntBASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Gm9988-201ENSMUST00000069786 435 ntBASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.86■□□□□ 0.29
Vps9d1Q8C190 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
Vps9d1Q8C190 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps9d1Q8C190 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms