Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Reep4-203ENSMUST00000226563 1444 ntBASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ckap4Q8BMK4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Gm13234-201ENSMUST00000120010 747 ntBASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ckap4Q8BMK4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.08■□□□□ 0.33
Ckap4Q8BMK4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ckap4Q8BMK4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ckap4Q8BMK4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ckap4Q8BMK4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ckap4Q8BMK4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ckap4Q8BMK4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ckap4Q8BMK4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Gm5874-201ENSMUST00000096101 508 ntBASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ckap4Q8BMK4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Gm18671-201ENSMUST00000214826 683 ntBASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ckap4Q8BMK4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms