Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1bQ8BH88 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1bQ8BH88 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.65■□□□□ 0.74
Depdc1bQ8BH88 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1bQ8BH88 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Gm20760-201ENSMUST00000179197 648 ntBASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Depdc1bQ8BH88 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Grk6-206ENSMUST00000224995 2971 ntBASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Depdc1bQ8BH88 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depdc1bQ8BH88 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Depdc1bQ8BH88 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Gm12527-201ENSMUST00000117967 564 ntBASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depdc1bQ8BH88 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1bQ8BH88 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1bQ8BH88 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1bQ8BH88 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1bQ8BH88 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Depdc1bQ8BH88 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1bQ8BH88 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Depdc1bQ8BH88 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Depdc1bQ8BH88 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms