Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Samm50Q8BGH2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Samm50Q8BGH2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.12■□□□□ 0.97
Samm50Q8BGH2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.12■□□□□ 0.97
Samm50Q8BGH2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Samm50Q8BGH2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Samm50Q8BGH2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Samm50Q8BGH2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Samm50Q8BGH2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Samm50Q8BGH2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Samm50Q8BGH2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Samm50Q8BGH2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Gm7290-201ENSMUST00000104990 617 ntBASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Gm12918-201ENSMUST00000120234 636 ntBASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Gm15710-201ENSMUST00000121821 636 ntBASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Gm5075-201ENSMUST00000196916 622 ntBASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.1■□□□□ 0.97
Samm50Q8BGH2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Samm50Q8BGH2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.09■□□□□ 0.97
Samm50Q8BGH2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Samm50Q8BGH2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Samm50Q8BGH2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Samm50Q8BGH2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.08■□□□□ 0.97
Samm50Q8BGH2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.08■□□□□ 0.97
Samm50Q8BGH2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.08■□□□□ 0.97
Samm50Q8BGH2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.08■□□□□ 0.97
Samm50Q8BGH2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Samm50Q8BGH2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Samm50Q8BGH2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Samm50Q8BGH2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Samm50Q8BGH2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Samm50Q8BGH2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Samm50Q8BGH2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Samm50Q8BGH2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms