Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ush1gQ80T11 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ush1gQ80T11 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ush1gQ80T11 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Ush1gQ80T11 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ush1gQ80T11 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.78■□□□□ 0.76
Ush1gQ80T11 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ush1gQ80T11 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.78■□□□□ 0.76
Ush1gQ80T11 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.78■□□□□ 0.76
Ush1gQ80T11 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Ush1gQ80T11 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.78■□□□□ 0.76
Ush1gQ80T11 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ush1gQ80T11 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Ush1gQ80T11 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ush1gQ80T11 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ush1gQ80T11 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ush1gQ80T11 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ush1gQ80T11 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ush1gQ80T11 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ush1gQ80T11 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ush1gQ80T11 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.76■□□□□ 0.75
Ush1gQ80T11 Gm43799-201ENSMUST00000201845 579 ntBASIC19.76■□□□□ 0.75
Ush1gQ80T11 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ush1gQ80T11 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ush1gQ80T11 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ush1gQ80T11 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ush1gQ80T11 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ush1gQ80T11 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ush1gQ80T11 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ush1gQ80T11 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ush1gQ80T11 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ush1gQ80T11 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ush1gQ80T11 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ush1gQ80T11 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.72■□□□□ 0.75
Ush1gQ80T11 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ush1gQ80T11 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ush1gQ80T11 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ush1gQ80T11 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.72■□□□□ 0.75
Ush1gQ80T11 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ush1gQ80T11 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ush1gQ80T11 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ush1gQ80T11 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ush1gQ80T11 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.71■□□□□ 0.75
Ush1gQ80T11 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ush1gQ80T11 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ush1gQ80T11 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ush1gQ80T11 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ush1gQ80T11 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.71■□□□□ 0.75
Ush1gQ80T11 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms