Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Exosc3Q7TQK4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Exosc3Q7TQK4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Gm11927-201ENSMUST00000118472 759 ntBASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Exosc3Q7TQK4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Gm12527-201ENSMUST00000117967 564 ntBASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Exosc3Q7TQK4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Exosc3Q7TQK4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Exosc3Q7TQK4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Exosc3Q7TQK4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Exosc3Q7TQK4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Exosc3Q7TQK4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Exosc3Q7TQK4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Exosc3Q7TQK4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.57■□□□□ 0.24
Exosc3Q7TQK4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Exosc3Q7TQK4 Gm27275-201ENSMUST00000184318 272 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms