Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Gm5417-201ENSMUST00000079706 384 ntBASIC18.67■□□□□ 0.58
Cspg5Q71M36 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cspg5Q71M36 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cspg5Q71M36 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.65■□□□□ 0.58
Cspg5Q71M36 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.65■□□□□ 0.58
Cspg5Q71M36 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Cspg5Q71M36 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.65■□□□□ 0.58
Cspg5Q71M36 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cspg5Q71M36 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cspg5Q71M36 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cspg5Q71M36 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cspg5Q71M36 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Cspg5Q71M36 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cspg5Q71M36 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.64■□□□□ 0.57
Cspg5Q71M36 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Cspg5Q71M36 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.64■□□□□ 0.57
Cspg5Q71M36 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cspg5Q71M36 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.63■□□□□ 0.57
Cspg5Q71M36 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Cspg5Q71M36 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.63■□□□□ 0.57
Cspg5Q71M36 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cspg5Q71M36 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Gm11643-201ENSMUST00000119578 864 ntBASIC18.62■□□□□ 0.57
Cspg5Q71M36 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg5Q71M36 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cspg5Q71M36 Rarb-207ENSMUST00000225921 2756 ntBASIC18.62■□□□□ 0.57
Cspg5Q71M36 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cspg5Q71M36 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms