Protein–RNA interactions for Protein: Q64705

Usf2, Upstream stimulatory factor 2, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf2Q64705 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usf2Q64705 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.34■□□□□ 0.05
Usf2Q64705 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Usf2Q64705 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.34■□□□□ 0.05
Usf2Q64705 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usf2Q64705 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usf2Q64705 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usf2Q64705 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usf2Q64705 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usf2Q64705 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usf2Q64705 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Usf2Q64705 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.34■□□□□ 0.05
Usf2Q64705 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Usf2Q64705 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.33■□□□□ 0.05
Usf2Q64705 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Usf2Q64705 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.33■□□□□ 0.05
Usf2Q64705 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usf2Q64705 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Usf2Q64705 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usf2Q64705 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Usf2Q64705 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usf2Q64705 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
Usf2Q64705 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usf2Q64705 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usf2Q64705 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Usf2Q64705 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usf2Q64705 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Usf2Q64705 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Usf2Q64705 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.32■□□□□ 0.04
Usf2Q64705 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.32■□□□□ 0.04
Usf2Q64705 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usf2Q64705 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.31■□□□□ 0.04
Usf2Q64705 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Usf2Q64705 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.31■□□□□ 0.04
Usf2Q64705 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Usf2Q64705 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Usf2Q64705 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usf2Q64705 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.31■□□□□ 0.04
Usf2Q64705 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Usf2Q64705 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Usf2Q64705 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.3■□□□□ 0.04
Usf2Q64705 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.3■□□□□ 0.04
Usf2Q64705 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.3■□□□□ 0.04
Usf2Q64705 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.3■□□□□ 0.04
Usf2Q64705 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Usf2Q64705 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Usf2Q64705 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.3■□□□□ 0.04
Usf2Q64705 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.3■□□□□ 0.04
Usf2Q64705 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Usf2Q64705 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usf2Q64705 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms