Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc3Q64519 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Sdc3Q64519 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sdc3Q64519 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.32■□□□□ 0.36
Sdc3Q64519 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.32■□□□□ 0.36
Sdc3Q64519 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.32■□□□□ 0.36
Sdc3Q64519 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sdc3Q64519 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc3Q64519 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.31■□□□□ 0.36
Sdc3Q64519 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc3Q64519 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.31■□□□□ 0.36
Sdc3Q64519 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc3Q64519 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc3Q64519 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sdc3Q64519 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.31■□□□□ 0.36
Sdc3Q64519 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc3Q64519 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc3Q64519 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc3Q64519 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc3Q64519 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc3Q64519 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sdc3Q64519 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc3Q64519 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc3Q64519 Dio3-201ENSMUST00000097228 1449 ntBASIC17.3■□□□□ 0.36
Sdc3Q64519 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc3Q64519 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Sdc3Q64519 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sdc3Q64519 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc3Q64519 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc3Q64519 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc3Q64519 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc3Q64519 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc3Q64519 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Sdc3Q64519 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Sdc3Q64519 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.29■□□□□ 0.36
Sdc3Q64519 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.29■□□□□ 0.36
Sdc3Q64519 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sdc3Q64519 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc3Q64519 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.28■□□□□ 0.36
Sdc3Q64519 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sdc3Q64519 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sdc3Q64519 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.28■□□□□ 0.36
Sdc3Q64519 Gm11249-201ENSMUST00000117071 859 ntBASIC17.28■□□□□ 0.36
Sdc3Q64519 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.28■□□□□ 0.36
Sdc3Q64519 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.28■□□□□ 0.36
Sdc3Q64519 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Sdc3Q64519 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc3Q64519 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc3Q64519 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc3Q64519 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc3Q64519 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.27■□□□□ 0.36
Sdc3Q64519 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.27■□□□□ 0.36
Sdc3Q64519 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc3Q64519 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc3Q64519 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc3Q64519 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms