Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SpenQ62504 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SpenQ62504 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SpenQ62504 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SpenQ62504 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.13■□□□□ 0.17
SpenQ62504 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.13■□□□□ 0.17
SpenQ62504 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SpenQ62504 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SpenQ62504 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SpenQ62504 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SpenQ62504 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SpenQ62504 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.13■□□□□ 0.17
SpenQ62504 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SpenQ62504 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SpenQ62504 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.12■□□□□ 0.17
SpenQ62504 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.12■□□□□ 0.17
SpenQ62504 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.12■□□□□ 0.17
SpenQ62504 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Gm27704-201ENSMUST00000185094 107 ntBASIC16.12■□□□□ 0.17
SpenQ62504 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SpenQ62504 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SpenQ62504 Gm24589-201ENSMUST00000116692 94 ntBASIC16.11■□□□□ 0.17
SpenQ62504 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SpenQ62504 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SpenQ62504 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SpenQ62504 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SpenQ62504 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SpenQ62504 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SpenQ62504 Gm38285-201ENSMUST00000192928 922 ntBASIC16.11■□□□□ 0.17
SpenQ62504 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SpenQ62504 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SpenQ62504 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SpenQ62504 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SpenQ62504 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.1■□□□□ 0.17
SpenQ62504 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SpenQ62504 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SpenQ62504 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SpenQ62504 Mir6349-201ENSMUST00000184059 97 ntBASIC16.1■□□□□ 0.17
SpenQ62504 Gm29518-201ENSMUST00000190858 372 ntBASIC16.1■□□□□ 0.17
SpenQ62504 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SpenQ62504 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SpenQ62504 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SpenQ62504 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SpenQ62504 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.09■□□□□ 0.17
SpenQ62504 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SpenQ62504 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.09■□□□□ 0.17
SpenQ62504 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SpenQ62504 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SpenQ62504 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.09■□□□□ 0.17
SpenQ62504 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SpenQ62504 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SpenQ62504 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SpenQ62504 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SpenQ62504 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SpenQ62504 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SpenQ62504 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SpenQ62504 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.08■□□□□ 0.17
SpenQ62504 Mir5130-201ENSMUST00000175160 84 ntBASIC16.08■□□□□ 0.17
SpenQ62504 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.08■□□□□ 0.17
SpenQ62504 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
SpenQ62504 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SpenQ62504 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SpenQ62504 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SpenQ62504 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SpenQ62504 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SpenQ62504 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SpenQ62504 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SpenQ62504 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
SpenQ62504 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SpenQ62504 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SpenQ62504 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
SpenQ62504 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.08■□□□□ 0.16
SpenQ62504 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.08■□□□□ 0.16
SpenQ62504 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SpenQ62504 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.08■□□□□ 0.16
SpenQ62504 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SpenQ62504 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SpenQ62504 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SpenQ62504 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SpenQ62504 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SpenQ62504 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SpenQ62504 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SpenQ62504 Gm38027-201ENSMUST00000192315 235 ntBASIC16.07■□□□□ 0.16
SpenQ62504 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SpenQ62504 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SpenQ62504 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.07■□□□□ 0.16
SpenQ62504 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.07■□□□□ 0.16
SpenQ62504 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms