Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Gm27011-201ENSMUST00000182352 972 ntBASIC17.25■□□□□ 0.35
CishQ62225 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CishQ62225 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CishQ62225 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CishQ62225 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CishQ62225 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.24■□□□□ 0.35
CishQ62225 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CishQ62225 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Gm11249-201ENSMUST00000117071 859 ntBASIC17.24■□□□□ 0.35
CishQ62225 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Gm38285-201ENSMUST00000192928 922 ntBASIC17.24■□□□□ 0.35
CishQ62225 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.24■□□□□ 0.35
CishQ62225 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CishQ62225 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CishQ62225 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CishQ62225 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CishQ62225 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.23■□□□□ 0.35
CishQ62225 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.23■□□□□ 0.35
CishQ62225 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CishQ62225 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.22■□□□□ 0.35
CishQ62225 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CishQ62225 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CishQ62225 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CishQ62225 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CishQ62225 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CishQ62225 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CishQ62225 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CishQ62225 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CishQ62225 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CishQ62225 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CishQ62225 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CishQ62225 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CishQ62225 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CishQ62225 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CishQ62225 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.21■□□□□ 0.35
CishQ62225 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CishQ62225 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CishQ62225 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CishQ62225 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CishQ62225 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.21■□□□□ 0.34
CishQ62225 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CishQ62225 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CishQ62225 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
CishQ62225 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CishQ62225 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CishQ62225 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CishQ62225 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CishQ62225 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CishQ62225 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CishQ62225 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.2■□□□□ 0.34
CishQ62225 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.2■□□□□ 0.34
CishQ62225 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.2■□□□□ 0.34
CishQ62225 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CishQ62225 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CishQ62225 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CishQ62225 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CishQ62225 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CishQ62225 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CishQ62225 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CishQ62225 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CishQ62225 Tgds-204ENSMUST00000228543 1594 ntBASIC17.19■□□□□ 0.34
CishQ62225 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.19■□□□□ 0.34
CishQ62225 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CishQ62225 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CishQ62225 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CishQ62225 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CishQ62225 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CishQ62225 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CishQ62225 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CishQ62225 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.19■□□□□ 0.34
CishQ62225 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CishQ62225 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CishQ62225 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CishQ62225 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CishQ62225 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms