Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.45■■□□□ 1.02
Scn9aQ62205 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scn9aQ62205 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.45■■□□□ 1.02
Scn9aQ62205 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn9aQ62205 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn9aQ62205 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scn9aQ62205 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn9aQ62205 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Scn9aQ62205 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn9aQ62205 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn9aQ62205 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scn9aQ62205 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.44■■□□□ 1.02
Scn9aQ62205 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.44■■□□□ 1.02
Scn9aQ62205 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scn9aQ62205 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn9aQ62205 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn9aQ62205 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn9aQ62205 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn9aQ62205 Gm16061-201ENSMUST00000122167 857 ntBASIC21.43■■□□□ 1.02
Scn9aQ62205 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC21.43■■□□□ 1.02
Scn9aQ62205 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn9aQ62205 Gm5587-201ENSMUST00000206270 674 ntBASIC21.43■■□□□ 1.02
Scn9aQ62205 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn9aQ62205 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn9aQ62205 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn9aQ62205 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scn9aQ62205 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn9aQ62205 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Scn9aQ62205 Gm27704-201ENSMUST00000185094 107 ntBASIC21.43■■□□□ 1.02
Scn9aQ62205 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scn9aQ62205 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.43■■□□□ 1.02
Scn9aQ62205 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Scn9aQ62205 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn9aQ62205 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Scn9aQ62205 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Scn9aQ62205 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn9aQ62205 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
Scn9aQ62205 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn9aQ62205 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn9aQ62205 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Scn9aQ62205 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Scn9aQ62205 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn9aQ62205 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Scn9aQ62205 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn9aQ62205 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.42■■□□□ 1.02
Scn9aQ62205 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Scn9aQ62205 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn9aQ62205 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Scn9aQ62205 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scn9aQ62205 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scn9aQ62205 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn9aQ62205 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn9aQ62205 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn9aQ62205 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn9aQ62205 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn9aQ62205 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn9aQ62205 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.41■■□□□ 1.02
Scn9aQ62205 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn9aQ62205 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.41■■□□□ 1.02
Scn9aQ62205 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Scn9aQ62205 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.41■■□□□ 1.02
Scn9aQ62205 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn9aQ62205 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Scn9aQ62205 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn9aQ62205 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn9aQ62205 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Scn9aQ62205 Gm17807-201ENSMUST00000186869 298 ntBASIC21.4■■□□□ 1.02
Scn9aQ62205 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Scn9aQ62205 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn9aQ62205 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn9aQ62205 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn9aQ62205 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn9aQ62205 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn9aQ62205 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn9aQ62205 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn9aQ62205 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn9aQ62205 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Scn9aQ62205 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn9aQ62205 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn9aQ62205 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn9aQ62205 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn9aQ62205 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn9aQ62205 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.39■■□□□ 1.01
Scn9aQ62205 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scn9aQ62205 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn9aQ62205 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.38■■□□□ 1.01
Scn9aQ62205 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.38■■□□□ 1.01
Scn9aQ62205 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scn9aQ62205 Gm7153-201ENSMUST00000117092 455 ntBASIC21.38■■□□□ 1.01
Scn9aQ62205 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Scn9aQ62205 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scn9aQ62205 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Scn9aQ62205 Gm9013-201ENSMUST00000132939 882 ntBASIC21.37■■□□□ 1.01
Scn9aQ62205 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.37■■□□□ 1.01
Scn9aQ62205 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Scn9aQ62205 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.37■■□□□ 1.01
Scn9aQ62205 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Scn9aQ62205 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn9aQ62205 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn9aQ62205 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms