Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SspnQ62147 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.11■□□□□ 0.01
SspnQ62147 Grk6-206ENSMUST00000224995 2971 ntBASIC15.11■□□□□ 0.01
SspnQ62147 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SspnQ62147 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.11■□□□□ 0.01
SspnQ62147 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SspnQ62147 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SspnQ62147 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.11■□□□□ 0.01
SspnQ62147 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.11■□□□□ 0.01
SspnQ62147 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.11■□□□□ 0.01
SspnQ62147 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SspnQ62147 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SspnQ62147 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SspnQ62147 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SspnQ62147 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SspnQ62147 Gm13534-201ENSMUST00000121169 513 ntBASIC15.1■□□□□ 0.01
SspnQ62147 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.1■□□□□ 0.01
SspnQ62147 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.1■□□□□ 0.01
SspnQ62147 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.1■□□□□ 0.01
SspnQ62147 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.1■□□□□ 0.01
SspnQ62147 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SspnQ62147 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SspnQ62147 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SspnQ62147 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.1■□□□□ 0.01
SspnQ62147 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.1■□□□□ 0.01
SspnQ62147 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SspnQ62147 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SspnQ62147 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.1■□□□□ 0.01
SspnQ62147 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SspnQ62147 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SspnQ62147 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SspnQ62147 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SspnQ62147 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.09■□□□□ 0.01
SspnQ62147 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.09■□□□□ 0.01
SspnQ62147 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SspnQ62147 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SspnQ62147 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SspnQ62147 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SspnQ62147 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SspnQ62147 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SspnQ62147 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SspnQ62147 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SspnQ62147 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SspnQ62147 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SspnQ62147 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
SspnQ62147 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SspnQ62147 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SspnQ62147 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.08■□□□□ 0
SspnQ62147 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.08■□□□□ 0
SspnQ62147 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
SspnQ62147 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SspnQ62147 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SspnQ62147 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SspnQ62147 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.08■□□□□ 0
SspnQ62147 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SspnQ62147 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.08■□□□□ 0
SspnQ62147 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.07■□□□□ 0
SspnQ62147 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
SspnQ62147 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SspnQ62147 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SspnQ62147 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.07■□□□□ 0
SspnQ62147 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.07■□□□□ 0
SspnQ62147 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SspnQ62147 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SspnQ62147 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SspnQ62147 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SspnQ62147 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SspnQ62147 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SspnQ62147 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.06■□□□□ 0
SspnQ62147 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SspnQ62147 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.06■□□□□ 0
SspnQ62147 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
SspnQ62147 Gm18671-201ENSMUST00000214826 683 ntBASIC15.06■□□□□ 0
SspnQ62147 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SspnQ62147 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms