Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Notch3Q61982 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Notch3Q61982 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Notch3Q61982 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.82□□□□□ -0.2
Notch3Q61982 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.82□□□□□ -0.2
Notch3Q61982 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Notch3Q61982 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.82□□□□□ -0.2
Notch3Q61982 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Notch3Q61982 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Notch3Q61982 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Notch3Q61982 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC13.81□□□□□ -0.2
Notch3Q61982 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.81□□□□□ -0.2
Notch3Q61982 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.81□□□□□ -0.2
Notch3Q61982 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.81□□□□□ -0.2
Notch3Q61982 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Notch3Q61982 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.81□□□□□ -0.2
Notch3Q61982 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Notch3Q61982 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.81□□□□□ -0.2
Notch3Q61982 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Notch3Q61982 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Notch3Q61982 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Notch3Q61982 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Notch3Q61982 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Notch3Q61982 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.8□□□□□ -0.2
Notch3Q61982 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.8□□□□□ -0.2
Notch3Q61982 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Notch3Q61982 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Notch3Q61982 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Notch3Q61982 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Notch3Q61982 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Notch3Q61982 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.79□□□□□ -0.2
Notch3Q61982 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.79□□□□□ -0.2
Notch3Q61982 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Notch3Q61982 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Notch3Q61982 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Notch3Q61982 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.79□□□□□ -0.2
Notch3Q61982 Gm43799-201ENSMUST00000201845 579 ntBASIC13.79□□□□□ -0.2
Notch3Q61982 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.79□□□□□ -0.2
Notch3Q61982 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Notch3Q61982 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms