Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Rai1Q61818 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.5■□□□□ 0.39
Rai1Q61818 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rai1Q61818 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rai1Q61818 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.49■□□□□ 0.39
Rai1Q61818 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.49■□□□□ 0.39
Rai1Q61818 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.49■□□□□ 0.39
Rai1Q61818 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rai1Q61818 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rai1Q61818 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.49■□□□□ 0.39
Rai1Q61818 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rai1Q61818 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rai1Q61818 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rai1Q61818 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rai1Q61818 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.48■□□□□ 0.39
Rai1Q61818 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rai1Q61818 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rai1Q61818 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rai1Q61818 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rai1Q61818 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rai1Q61818 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rai1Q61818 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rai1Q61818 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.48■□□□□ 0.39
Rai1Q61818 Gm18101-201ENSMUST00000215769 548 ntBASIC17.48■□□□□ 0.39
Rai1Q61818 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rai1Q61818 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Rai1Q61818 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rai1Q61818 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rai1Q61818 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.47■□□□□ 0.39
Rai1Q61818 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rai1Q61818 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rai1Q61818 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.47■□□□□ 0.39
Rai1Q61818 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.47■□□□□ 0.39
Rai1Q61818 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rai1Q61818 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rai1Q61818 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rai1Q61818 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rai1Q61818 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rai1Q61818 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rai1Q61818 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rai1Q61818 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rai1Q61818 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rai1Q61818 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rai1Q61818 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rai1Q61818 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Rai1Q61818 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.46■□□□□ 0.38
Rai1Q61818 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rai1Q61818 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.45■□□□□ 0.38
Rai1Q61818 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rai1Q61818 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.45■□□□□ 0.38
Rai1Q61818 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rai1Q61818 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rai1Q61818 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rai1Q61818 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Rai1Q61818 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rai1Q61818 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rai1Q61818 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rai1Q61818 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rai1Q61818 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rai1Q61818 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rai1Q61818 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Rai1Q61818 Gm13401-201ENSMUST00000117074 291 ntBASIC17.44■□□□□ 0.38
Rai1Q61818 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rai1Q61818 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rai1Q61818 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rai1Q61818 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rai1Q61818 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rai1Q61818 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.43■□□□□ 0.38
Rai1Q61818 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.43■□□□□ 0.38
Rai1Q61818 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rai1Q61818 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.43■□□□□ 0.38
Rai1Q61818 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rai1Q61818 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rai1Q61818 Gm4974-201ENSMUST00000209974 875 ntBASIC17.42■□□□□ 0.38
Rai1Q61818 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rai1Q61818 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rai1Q61818 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rai1Q61818 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rai1Q61818 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rai1Q61818 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.42■□□□□ 0.38
Rai1Q61818 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rai1Q61818 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rai1Q61818 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms