Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.83■□□□□ 0.61
Smarcd1Q61466 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcd1Q61466 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcd1Q61466 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcd1Q61466 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Smarcd1Q61466 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Smarcd1Q61466 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.83■□□□□ 0.6
Smarcd1Q61466 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd1Q61466 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd1Q61466 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd1Q61466 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd1Q61466 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd1Q61466 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcd1Q61466 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd1Q61466 Tgds-204ENSMUST00000228543 1594 ntBASIC18.82■□□□□ 0.6
Smarcd1Q61466 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd1Q61466 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd1Q61466 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smarcd1Q61466 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd1Q61466 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.82■□□□□ 0.6
Smarcd1Q61466 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd1Q61466 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Smarcd1Q61466 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcd1Q61466 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Mir6349-201ENSMUST00000184059 97 ntBASIC18.81■□□□□ 0.6
Smarcd1Q61466 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.81■□□□□ 0.6
Smarcd1Q61466 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Smarcd1Q61466 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Smarcd1Q61466 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.8■□□□□ 0.6
Smarcd1Q61466 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.8■□□□□ 0.6
Smarcd1Q61466 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcd1Q61466 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd1Q61466 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd1Q61466 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd1Q61466 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.79■□□□□ 0.6
Smarcd1Q61466 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd1Q61466 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd1Q61466 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd1Q61466 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd1Q61466 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.79■□□□□ 0.6
Smarcd1Q61466 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcd1Q61466 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.78■□□□□ 0.6
Smarcd1Q61466 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.78■□□□□ 0.6
Smarcd1Q61466 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcd1Q61466 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcd1Q61466 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Smarcd1Q61466 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smarcd1Q61466 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Smarcd1Q61466 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.76■□□□□ 0.59
Smarcd1Q61466 Mir2861-201ENSMUST00000175539 82 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms