Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six4Q61321 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Six4Q61321 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six4Q61321 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six4Q61321 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six4Q61321 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six4Q61321 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six4Q61321 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Six4Q61321 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.25■□□□□ 0.51
Six4Q61321 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Six4Q61321 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Six4Q61321 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Six4Q61321 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Six4Q61321 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six4Q61321 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.23■□□□□ 0.51
Six4Q61321 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Six4Q61321 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Six4Q61321 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six4Q61321 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.22■□□□□ 0.51
Six4Q61321 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.22■□□□□ 0.51
Six4Q61321 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Six4Q61321 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Six4Q61321 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six4Q61321 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Six4Q61321 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six4Q61321 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six4Q61321 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Six4Q61321 Trmt13-210ENSMUST00000198454 880 ntBASIC18.21■□□□□ 0.51
Six4Q61321 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Six4Q61321 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.21■□□□□ 0.51
Six4Q61321 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six4Q61321 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six4Q61321 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six4Q61321 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.21■□□□□ 0.51
Six4Q61321 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Six4Q61321 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.2■□□□□ 0.5
Six4Q61321 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 Gm27011-201ENSMUST00000182352 972 ntBASIC18.2■□□□□ 0.5
Six4Q61321 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Six4Q61321 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.2■□□□□ 0.5
Six4Q61321 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.2■□□□□ 0.5
Six4Q61321 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Six4Q61321 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six4Q61321 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms