Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.96■□□□□ 0.47
Col12a1Q60847 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.96■□□□□ 0.47
Col12a1Q60847 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Col12a1Q60847 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Col12a1Q60847 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Gm7370-201ENSMUST00000219471 767 ntBASIC17.96■□□□□ 0.47
Col12a1Q60847 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col12a1Q60847 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col12a1Q60847 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col12a1Q60847 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col12a1Q60847 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col12a1Q60847 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Col12a1Q60847 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col12a1Q60847 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.95■□□□□ 0.46
Col12a1Q60847 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Col12a1Q60847 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.95■□□□□ 0.46
Col12a1Q60847 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col12a1Q60847 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col12a1Q60847 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col12a1Q60847 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col12a1Q60847 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col12a1Q60847 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Col12a1Q60847 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col12a1Q60847 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col12a1Q60847 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.94■□□□□ 0.46
Col12a1Q60847 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col12a1Q60847 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col12a1Q60847 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.94■□□□□ 0.46
Col12a1Q60847 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col12a1Q60847 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.94■□□□□ 0.46
Col12a1Q60847 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col12a1Q60847 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.94■□□□□ 0.46
Col12a1Q60847 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col12a1Q60847 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col12a1Q60847 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col12a1Q60847 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col12a1Q60847 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.94■□□□□ 0.46
Col12a1Q60847 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.94■□□□□ 0.46
Col12a1Q60847 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col12a1Q60847 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col12a1Q60847 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col12a1Q60847 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col12a1Q60847 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col12a1Q60847 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col12a1Q60847 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.93■□□□□ 0.46
Col12a1Q60847 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col12a1Q60847 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col12a1Q60847 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col12a1Q60847 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col12a1Q60847 Mir8098-201ENSMUST00000184011 137 ntBASIC17.92■□□□□ 0.46
Col12a1Q60847 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col12a1Q60847 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col12a1Q60847 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col12a1Q60847 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col12a1Q60847 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col12a1Q60847 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Col12a1Q60847 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col12a1Q60847 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col12a1Q60847 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col12a1Q60847 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col12a1Q60847 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Col12a1Q60847 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col12a1Q60847 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col12a1Q60847 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col12a1Q60847 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col12a1Q60847 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col12a1Q60847 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col12a1Q60847 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col12a1Q60847 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col12a1Q60847 Gm5864-201ENSMUST00000202263 970 ntBASIC17.91■□□□□ 0.46
Col12a1Q60847 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col12a1Q60847 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col12a1Q60847 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col12a1Q60847 Gm11950-201ENSMUST00000121615 838 ntBASIC17.91■□□□□ 0.46
Col12a1Q60847 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.91■□□□□ 0.46
Col12a1Q60847 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Col12a1Q60847 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col12a1Q60847 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col12a1Q60847 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.9■□□□□ 0.46
Col12a1Q60847 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col12a1Q60847 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col12a1Q60847 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col12a1Q60847 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col12a1Q60847 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col12a1Q60847 Gm18733-201ENSMUST00000173950 856 ntBASIC17.9■□□□□ 0.46
Col12a1Q60847 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col12a1Q60847 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Col12a1Q60847 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col12a1Q60847 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Col12a1Q60847 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Col12a1Q60847 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms