Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Satb1Q60611 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.66■□□□□ 0.58
Satb1Q60611 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Satb1Q60611 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.66■□□□□ 0.58
Satb1Q60611 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Satb1Q60611 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Satb1Q60611 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Satb1Q60611 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Satb1Q60611 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Satb1Q60611 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Satb1Q60611 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Satb1Q60611 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Satb1Q60611 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Satb1Q60611 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Satb1Q60611 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Satb1Q60611 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Satb1Q60611 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Satb1Q60611 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.64■□□□□ 0.58
Satb1Q60611 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.64■□□□□ 0.58
Satb1Q60611 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Satb1Q60611 Gm9103-201ENSMUST00000119371 405 ntBASIC18.64■□□□□ 0.57
Satb1Q60611 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.64■□□□□ 0.57
Satb1Q60611 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Satb1Q60611 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Satb1Q60611 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Satb1Q60611 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Satb1Q60611 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.64■□□□□ 0.57
Satb1Q60611 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Satb1Q60611 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Satb1Q60611 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Satb1Q60611 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.63■□□□□ 0.57
Satb1Q60611 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Gm7889-201ENSMUST00000185591 958 ntBASIC18.63■□□□□ 0.57
Satb1Q60611 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Satb1Q60611 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.63■□□□□ 0.57
Satb1Q60611 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Satb1Q60611 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Satb1Q60611 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Satb1Q60611 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Satb1Q60611 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.62■□□□□ 0.57
Satb1Q60611 Gm11539-201ENSMUST00000119837 557 ntBASIC18.62■□□□□ 0.57
Satb1Q60611 Gm13436-201ENSMUST00000120418 567 ntBASIC18.62■□□□□ 0.57
Satb1Q60611 Gm23634-201ENSMUST00000175071 91 ntBASIC18.62■□□□□ 0.57
Satb1Q60611 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.62■□□□□ 0.57
Satb1Q60611 Gm21814-202ENSMUST00000203277 873 ntBASIC18.62■□□□□ 0.57
Satb1Q60611 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.62■□□□□ 0.57
Satb1Q60611 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Satb1Q60611 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Satb1Q60611 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Satb1Q60611 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Satb1Q60611 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Satb1Q60611 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Satb1Q60611 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Satb1Q60611 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Satb1Q60611 Gm25925-201ENSMUST00000158314 306 ntBASIC18.61■□□□□ 0.57
Satb1Q60611 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Satb1Q60611 Gm33142-201ENSMUST00000193913 867 ntBASIC18.61■□□□□ 0.57
Satb1Q60611 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.61■□□□□ 0.57
Satb1Q60611 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.61■□□□□ 0.57
Satb1Q60611 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.61■□□□□ 0.57
Satb1Q60611 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Satb1Q60611 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Satb1Q60611 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Satb1Q60611 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Satb1Q60611 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Satb1Q60611 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Satb1Q60611 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Satb1Q60611 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Satb1Q60611 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Satb1Q60611 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Satb1Q60611 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Satb1Q60611 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Satb1Q60611 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Satb1Q60611 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Satb1Q60611 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Satb1Q60611 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Satb1Q60611 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.59■□□□□ 0.57
Satb1Q60611 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms