Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav7d-3Q5R1I1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Gm13146-201ENSMUST00000118508 780 ntBASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav7d-3Q5R1I1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav7d-3Q5R1I1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav7d-3Q5R1I1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav7d-3Q5R1I1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav7d-3Q5R1I1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav7d-3Q5R1I1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav7d-3Q5R1I1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav7d-3Q5R1I1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav7d-3Q5R1I1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav7d-3Q5R1I1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms