Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-4Q5R1I0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Gm15378-201ENSMUST00000121894 207 ntBASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav6d-4Q5R1I0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Gm10138-203ENSMUST00000206952 366 ntBASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav6d-4Q5R1I0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Gm10698-201ENSMUST00000182663 604 ntBASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-4Q5R1I0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-4Q5R1I0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-4Q5R1I0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms