Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3-3Q5R1C3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3-3Q5R1C3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Gm43530-201ENSMUST00000195920 274 ntBASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3-3Q5R1C3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Gm9870-201ENSMUST00000063874 645 ntBASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Trav3-3Q5R1C3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav3-3Q5R1C3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trav3-3Q5R1C3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms