Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fst-202ENSMUST00000223640 2612 ntBASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.52■■□□□ 1.04
Rnf20Q5DTM8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rnf20Q5DTM8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Rnf20Q5DTM8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Gm37179-201ENSMUST00000194862 823 ntBASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf20Q5DTM8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 Gm12933-201ENSMUST00000120203 872 ntBASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnf20Q5DTM8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf20Q5DTM8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf20Q5DTM8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf20Q5DTM8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.48■■□□□ 1.03
Rnf20Q5DTM8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.48■■□□□ 1.03
Rnf20Q5DTM8 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.48■■□□□ 1.03
Rnf20Q5DTM8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf20Q5DTM8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf20Q5DTM8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf20Q5DTM8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnf20Q5DTM8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Gm13148-201ENSMUST00000118892 745 ntBASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rnf20Q5DTM8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.46■■□□□ 1.03
Rnf20Q5DTM8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Rnf20Q5DTM8 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.45■■□□□ 1.03
Rnf20Q5DTM8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rnf20Q5DTM8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms