Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.89■□□□□ 0.45
Scn2bQ56A07 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.88■□□□□ 0.45
Scn2bQ56A07 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.88■□□□□ 0.45
Scn2bQ56A07 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.88■□□□□ 0.45
Scn2bQ56A07 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn2bQ56A07 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn2bQ56A07 Tgds-204ENSMUST00000228543 1594 ntBASIC17.87■□□□□ 0.45
Scn2bQ56A07 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Gm27405-201ENSMUST00000184201 112 ntBASIC17.86■□□□□ 0.45
Scn2bQ56A07 Gm7291-201ENSMUST00000199147 382 ntBASIC17.86■□□□□ 0.45
Scn2bQ56A07 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Gm7514-201ENSMUST00000209475 934 ntBASIC17.86■□□□□ 0.45
Scn2bQ56A07 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn2bQ56A07 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.86■□□□□ 0.45
Scn2bQ56A07 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn2bQ56A07 Gm10849-201ENSMUST00000100397 618 ntBASIC17.85■□□□□ 0.45
Scn2bQ56A07 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.85■□□□□ 0.45
Scn2bQ56A07 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn2bQ56A07 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn2bQ56A07 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn2bQ56A07 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scn2bQ56A07 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn2bQ56A07 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Scn2bQ56A07 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn2bQ56A07 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.85■□□□□ 0.45
Scn2bQ56A07 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn2bQ56A07 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.84■□□□□ 0.45
Scn2bQ56A07 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.84■□□□□ 0.45
Scn2bQ56A07 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn2bQ56A07 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn2bQ56A07 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn2bQ56A07 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms