Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Gm10060-201ENSMUST00000212002 111 ntBASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Gm15467-201ENSMUST00000120582 445 ntBASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Herc2Q4U2R1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Gm12895-201ENSMUST00000122214 226 ntBASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Mir5126-201ENSMUST00000175513 77 ntBASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Gm26039-201ENSMUST00000158152 144 ntBASIC10.85□□□□□ -0.67
Herc2Q4U2R1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Herc2Q4U2R1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Gm9694-201ENSMUST00000193347 1189 ntBASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Mir2861-201ENSMUST00000175539 82 ntBASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Herc2Q4U2R1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Gm5745-201ENSMUST00000183748 313 ntBASIC10.83□□□□□ -0.68
Herc2Q4U2R1 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Gm4995-201ENSMUST00000117247 432 ntBASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Gm7862-201ENSMUST00000121461 292 ntBASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Herc2Q4U2R1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Gm37035-201ENSMUST00000194809 2148 ntBASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Herc2Q4U2R1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms