Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Gm15565-201ENSMUST00000118890 427 ntBASIC21.53■■□□□ 1.04
SfswapQ3USH5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.53■■□□□ 1.04
SfswapQ3USH5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SfswapQ3USH5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SfswapQ3USH5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SfswapQ3USH5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SfswapQ3USH5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SfswapQ3USH5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SfswapQ3USH5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SfswapQ3USH5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SfswapQ3USH5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SfswapQ3USH5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SfswapQ3USH5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SfswapQ3USH5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.52■■□□□ 1.04
SfswapQ3USH5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SfswapQ3USH5 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.52■■□□□ 1.04
SfswapQ3USH5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SfswapQ3USH5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SfswapQ3USH5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SfswapQ3USH5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SfswapQ3USH5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SfswapQ3USH5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.5■■□□□ 1.03
SfswapQ3USH5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SfswapQ3USH5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SfswapQ3USH5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SfswapQ3USH5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Mir5122-201ENSMUST00000175004 89 ntBASIC21.49■■□□□ 1.03
SfswapQ3USH5 Gm37292-201ENSMUST00000192062 758 ntBASIC21.49■■□□□ 1.03
SfswapQ3USH5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SfswapQ3USH5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.48■■□□□ 1.03
SfswapQ3USH5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.48■■□□□ 1.03
SfswapQ3USH5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SfswapQ3USH5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.47■■□□□ 1.03
SfswapQ3USH5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.47■■□□□ 1.03
SfswapQ3USH5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SfswapQ3USH5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms