Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf3aQ3ULJ3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Upf3aQ3ULJ3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf3aQ3ULJ3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf3aQ3ULJ3 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.05■□□□□ 0.64
Upf3aQ3ULJ3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upf3aQ3ULJ3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Gm6659-201ENSMUST00000174752 547 ntBASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upf3aQ3ULJ3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Upf3aQ3ULJ3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Upf3aQ3ULJ3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Upf3aQ3ULJ3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upf3aQ3ULJ3 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.02■□□□□ 0.64
Upf3aQ3ULJ3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upf3aQ3ULJ3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Upf3aQ3ULJ3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Upf3aQ3ULJ3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upf3aQ3ULJ3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Upf3aQ3ULJ3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Upf3aQ3ULJ3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Upf3aQ3ULJ3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Upf3aQ3ULJ3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upf3aQ3ULJ3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upf3aQ3ULJ3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Gm38345-201ENSMUST00000192635 1748 ntBASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19■□□□□ 0.63
Upf3aQ3ULJ3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upf3aQ3ULJ3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Upf3aQ3ULJ3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Upf3aQ3ULJ3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upf3aQ3ULJ3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upf3aQ3ULJ3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upf3aQ3ULJ3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Upf3aQ3ULJ3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms