Protein–RNA interactions for Protein: Q3UA16

Spc25, Kinetochore protein Spc25, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spc25Q3UA16 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Gm13234-201ENSMUST00000120010 747 ntBASIC16.55■□□□□ 0.24
Spc25Q3UA16 Gm18671-201ENSMUST00000214826 683 ntBASIC16.55■□□□□ 0.24
Spc25Q3UA16 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Spc25Q3UA16 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spc25Q3UA16 Reep4-203ENSMUST00000226563 1444 ntBASIC16.54■□□□□ 0.24
Spc25Q3UA16 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spc25Q3UA16 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Spc25Q3UA16 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Spc25Q3UA16 Gm38205-201ENSMUST00000192243 258 ntBASIC16.54■□□□□ 0.24
Spc25Q3UA16 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Spc25Q3UA16 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Spc25Q3UA16 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Spc25Q3UA16 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.53■□□□□ 0.24
Spc25Q3UA16 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Gm18284-201ENSMUST00000172604 624 ntBASIC16.53■□□□□ 0.24
Spc25Q3UA16 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Spc25Q3UA16 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Spc25Q3UA16 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spc25Q3UA16 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spc25Q3UA16 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spc25Q3UA16 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Spc25Q3UA16 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.52■□□□□ 0.24
Spc25Q3UA16 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.52■□□□□ 0.24
Spc25Q3UA16 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Spc25Q3UA16 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Spc25Q3UA16 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Spc25Q3UA16 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Spc25Q3UA16 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Spc25Q3UA16 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Spc25Q3UA16 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Spc25Q3UA16 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Spc25Q3UA16 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.51■□□□□ 0.23
Spc25Q3UA16 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Gm42642-201ENSMUST00000200683 355 ntBASIC16.51■□□□□ 0.23
Spc25Q3UA16 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.51■□□□□ 0.23
Spc25Q3UA16 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.51■□□□□ 0.23
Spc25Q3UA16 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Spc25Q3UA16 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.5■□□□□ 0.23
Spc25Q3UA16 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Spc25Q3UA16 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Spc25Q3UA16 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.49■□□□□ 0.23
Spc25Q3UA16 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spc25Q3UA16 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spc25Q3UA16 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spc25Q3UA16 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Spc25Q3UA16 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms