Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ptchd3Q0EEE2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Gm7860-201ENSMUST00000121190 879 ntBASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptchd3Q0EEE2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptchd3Q0EEE2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptchd3Q0EEE2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptchd3Q0EEE2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.4■□□□□ 0.38
Ptchd3Q0EEE2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms