Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.32■□□□□ 0.52
Cdh6P97326 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh6P97326 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh6P97326 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh6P97326 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh6P97326 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh6P97326 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cdh6P97326 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh6P97326 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdh6P97326 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh6P97326 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.31■□□□□ 0.52
Cdh6P97326 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.31■□□□□ 0.52
Cdh6P97326 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh6P97326 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh6P97326 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh6P97326 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh6P97326 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cdh6P97326 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh6P97326 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh6P97326 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh6P97326 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cdh6P97326 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.3■□□□□ 0.52
Cdh6P97326 Gm38285-201ENSMUST00000192928 922 ntBASIC18.3■□□□□ 0.52
Cdh6P97326 Zfp783-201ENSMUST00000095946 670 ntBASIC18.3■□□□□ 0.52
Cdh6P97326 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdh6P97326 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.3■□□□□ 0.52
Cdh6P97326 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh6P97326 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh6P97326 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh6P97326 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.29■□□□□ 0.52
Cdh6P97326 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdh6P97326 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.29■□□□□ 0.52
Cdh6P97326 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh6P97326 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh6P97326 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh6P97326 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh6P97326 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh6P97326 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh6P97326 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh6P97326 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh6P97326 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh6P97326 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh6P97326 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdh6P97326 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdh6P97326 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdh6P97326 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.28■□□□□ 0.52
Cdh6P97326 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh6P97326 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdh6P97326 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh6P97326 Dio3-201ENSMUST00000097228 1449 ntBASIC18.28■□□□□ 0.52
Cdh6P97326 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh6P97326 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.28■□□□□ 0.52
Cdh6P97326 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh6P97326 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Cdh6P97326 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cdh6P97326 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
Cdh6P97326 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh6P97326 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh6P97326 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh6P97326 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdh6P97326 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh6P97326 Gm12896-201ENSMUST00000118430 226 ntBASIC18.27■□□□□ 0.52
Cdh6P97326 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh6P97326 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.27■□□□□ 0.52
Cdh6P97326 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cdh6P97326 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.27■□□□□ 0.52
Cdh6P97326 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh6P97326 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh6P97326 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Cdh6P97326 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Cdh6P97326 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh6P97326 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh6P97326 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh6P97326 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh6P97326 Gm20049-201ENSMUST00000219950 730 ntBASIC18.26■□□□□ 0.51
Cdh6P97326 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh6P97326 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh6P97326 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh6P97326 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh6P97326 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh6P97326 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cdh6P97326 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh6P97326 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh6P97326 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Cdh6P97326 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh6P97326 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms