Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp46P62069 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp46P62069 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp46P62069 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp46P62069 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp46P62069 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Usp46P62069 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.85■□□□□ 0.61
Usp46P62069 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp46P62069 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp46P62069 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp46P62069 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp46P62069 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp46P62069 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Gm38285-201ENSMUST00000192928 922 ntBASIC18.84■□□□□ 0.61
Usp46P62069 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Usp46P62069 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Usp46P62069 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp46P62069 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp46P62069 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.83■□□□□ 0.61
Usp46P62069 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp46P62069 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp46P62069 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp46P62069 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp46P62069 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp46P62069 Gm15378-201ENSMUST00000121894 207 ntBASIC18.83■□□□□ 0.6
Usp46P62069 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.83■□□□□ 0.6
Usp46P62069 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp46P62069 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp46P62069 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.83■□□□□ 0.6
Usp46P62069 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.83■□□□□ 0.6
Usp46P62069 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp46P62069 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp46P62069 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp46P62069 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Usp46P62069 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp46P62069 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Usp46P62069 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp46P62069 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp46P62069 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.82■□□□□ 0.6
Usp46P62069 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Usp46P62069 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp46P62069 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp46P62069 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp46P62069 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp46P62069 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Usp46P62069 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp46P62069 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Usp46P62069 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp46P62069 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp46P62069 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp46P62069 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp46P62069 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp46P62069 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp46P62069 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp46P62069 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp46P62069 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Usp46P62069 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Usp46P62069 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.81■□□□□ 0.6
Usp46P62069 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Usp46P62069 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp46P62069 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp46P62069 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp46P62069 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Usp46P62069 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp46P62069 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp46P62069 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp46P62069 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp46P62069 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp46P62069 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Usp46P62069 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp46P62069 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp46P62069 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp46P62069 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp46P62069 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp46P62069 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp46P62069 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp46P62069 Grk6-206ENSMUST00000224995 2971 ntBASIC18.8■□□□□ 0.6
Usp46P62069 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp46P62069 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp46P62069 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Usp46P62069 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp46P62069 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp46P62069 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp46P62069 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.79■□□□□ 0.6
Usp46P62069 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.79■□□□□ 0.6
Usp46P62069 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.79■□□□□ 0.6
Usp46P62069 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms