Protein–RNA interactions for Protein: P59114

Pcif1, Phosphorylated CTD-interacting factor 1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1P59114 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.27■□□□□ 0.83
Pcif1P59114 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcif1P59114 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Pcif1P59114 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcif1P59114 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcif1P59114 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcif1P59114 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcif1P59114 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcif1P59114 Gm13158-201ENSMUST00000122007 736 ntBASIC20.26■□□□□ 0.83
Pcif1P59114 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcif1P59114 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.26■□□□□ 0.83
Pcif1P59114 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcif1P59114 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcif1P59114 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcif1P59114 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcif1P59114 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcif1P59114 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcif1P59114 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcif1P59114 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcif1P59114 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcif1P59114 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcif1P59114 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcif1P59114 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcif1P59114 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcif1P59114 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcif1P59114 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcif1P59114 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcif1P59114 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcif1P59114 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
Pcif1P59114 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcif1P59114 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcif1P59114 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcif1P59114 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcif1P59114 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcif1P59114 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcif1P59114 Fst-202ENSMUST00000223640 2612 ntBASIC20.23■□□□□ 0.83
Pcif1P59114 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcif1P59114 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcif1P59114 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcif1P59114 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.23■□□□□ 0.83
Pcif1P59114 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcif1P59114 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.23■□□□□ 0.83
Pcif1P59114 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.23■□□□□ 0.83
Pcif1P59114 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcif1P59114 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.23■□□□□ 0.83
Pcif1P59114 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcif1P59114 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcif1P59114 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcif1P59114 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcif1P59114 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcif1P59114 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcif1P59114 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcif1P59114 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcif1P59114 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcif1P59114 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcif1P59114 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcif1P59114 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcif1P59114 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcif1P59114 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcif1P59114 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcif1P59114 Tgds-204ENSMUST00000228543 1594 ntBASIC20.21■□□□□ 0.83
Pcif1P59114 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcif1P59114 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcif1P59114 Gm18666-201ENSMUST00000190039 958 ntBASIC20.21■□□□□ 0.83
Pcif1P59114 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcif1P59114 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.83
Pcif1P59114 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcif1P59114 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Pcif1P59114 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcif1P59114 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcif1P59114 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcif1P59114 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcif1P59114 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcif1P59114 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcif1P59114 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.2■□□□□ 0.82
Pcif1P59114 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Pcif1P59114 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcif1P59114 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcif1P59114 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcif1P59114 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.19■□□□□ 0.82
Pcif1P59114 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Pcif1P59114 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.19■□□□□ 0.82
Pcif1P59114 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcif1P59114 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.19■□□□□ 0.82
Pcif1P59114 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.19■□□□□ 0.82
Pcif1P59114 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcif1P59114 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcif1P59114 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcif1P59114 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
Pcif1P59114 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms