Protein–RNA interactions for Protein: P56942

Pmch, Pro-MCH, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PmchP56942 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PmchP56942 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PmchP56942 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PmchP56942 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PmchP56942 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PmchP56942 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PmchP56942 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PmchP56942 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PmchP56942 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PmchP56942 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.79□□□□□ -0.04
PmchP56942 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PmchP56942 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PmchP56942 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.79□□□□□ -0.04
PmchP56942 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.78□□□□□ -0.04
PmchP56942 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.78□□□□□ -0.04
PmchP56942 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PmchP56942 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PmchP56942 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PmchP56942 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PmchP56942 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PmchP56942 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PmchP56942 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PmchP56942 Gm43137-201ENSMUST00000198052 594 ntBASIC14.77□□□□□ -0.05
PmchP56942 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PmchP56942 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PmchP56942 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PmchP56942 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PmchP56942 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PmchP56942 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PmchP56942 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PmchP56942 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PmchP56942 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PmchP56942 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.77□□□□□ -0.05
PmchP56942 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PmchP56942 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.76□□□□□ -0.05
PmchP56942 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PmchP56942 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.76□□□□□ -0.05
PmchP56942 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.76□□□□□ -0.05
PmchP56942 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.76□□□□□ -0.05
PmchP56942 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.76□□□□□ -0.05
PmchP56942 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PmchP56942 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PmchP56942 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PmchP56942 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PmchP56942 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PmchP56942 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PmchP56942 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PmchP56942 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PmchP56942 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PmchP56942 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PmchP56942 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.75□□□□□ -0.05
PmchP56942 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.75□□□□□ -0.05
PmchP56942 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PmchP56942 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PmchP56942 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PmchP56942 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PmchP56942 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.75□□□□□ -0.05
PmchP56942 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PmchP56942 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms