Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NcanP55066 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NcanP55066 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NcanP55066 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NcanP55066 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NcanP55066 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.13■□□□□ 0.65
NcanP55066 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NcanP55066 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NcanP55066 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NcanP55066 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NcanP55066 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NcanP55066 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NcanP55066 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NcanP55066 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NcanP55066 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NcanP55066 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NcanP55066 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.12■□□□□ 0.65
NcanP55066 Mir3081-201ENSMUST00000175305 84 ntBASIC19.12■□□□□ 0.65
NcanP55066 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NcanP55066 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.12■□□□□ 0.65
NcanP55066 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NcanP55066 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.12■□□□□ 0.65
NcanP55066 Gm18115-201ENSMUST00000221209 621 ntBASIC19.12■□□□□ 0.65
NcanP55066 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NcanP55066 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NcanP55066 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NcanP55066 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.11■□□□□ 0.65
NcanP55066 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NcanP55066 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NcanP55066 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.11■□□□□ 0.65
NcanP55066 Gm28659-201ENSMUST00000188013 759 ntBASIC19.11■□□□□ 0.65
NcanP55066 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.11■□□□□ 0.65
NcanP55066 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NcanP55066 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NcanP55066 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NcanP55066 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NcanP55066 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NcanP55066 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NcanP55066 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NcanP55066 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NcanP55066 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
NcanP55066 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NcanP55066 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NcanP55066 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NcanP55066 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NcanP55066 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NcanP55066 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NcanP55066 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NcanP55066 Gm4974-201ENSMUST00000209974 875 ntBASIC19.1■□□□□ 0.65
NcanP55066 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.1■□□□□ 0.65
NcanP55066 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NcanP55066 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NcanP55066 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NcanP55066 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NcanP55066 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NcanP55066 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Gm7638-201ENSMUST00000121348 967 ntBASIC19.09■□□□□ 0.65
NcanP55066 Gm13474-201ENSMUST00000122466 815 ntBASIC19.09■□□□□ 0.65
NcanP55066 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.09■□□□□ 0.65
NcanP55066 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.09■□□□□ 0.65
NcanP55066 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NcanP55066 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NcanP55066 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NcanP55066 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
NcanP55066 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NcanP55066 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NcanP55066 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NcanP55066 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.08■□□□□ 0.65
NcanP55066 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NcanP55066 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NcanP55066 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.08■□□□□ 0.64
NcanP55066 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NcanP55066 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NcanP55066 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NcanP55066 Mir1668-201ENSMUST00000184114 107 ntBASIC19.08■□□□□ 0.64
NcanP55066 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.08■□□□□ 0.64
NcanP55066 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NcanP55066 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NcanP55066 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NcanP55066 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms