Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Atxn1P54254 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Atxn1P54254 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
Atxn1P54254 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Atxn1P54254 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.89■□□□□ 0.45
Atxn1P54254 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 Gm43183-201ENSMUST00000200632 547 ntBASIC17.89■□□□□ 0.45
Atxn1P54254 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.89■□□□□ 0.45
Atxn1P54254 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Atxn1P54254 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atxn1P54254 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Atxn1P54254 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atxn1P54254 Gm10013-201ENSMUST00000106074 672 ntBASIC17.88■□□□□ 0.45
Atxn1P54254 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atxn1P54254 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.88■□□□□ 0.45
Atxn1P54254 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atxn1P54254 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atxn1P54254 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.88■□□□□ 0.45
Atxn1P54254 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atxn1P54254 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Atxn1P54254 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 AA414768-201ENSMUST00000121924 1257 ntBASIC17.87■□□□□ 0.45
Atxn1P54254 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 Flg-201ENSMUST00000050758 1488 ntBASIC17.87■□□□□ 0.45
Atxn1P54254 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Atxn1P54254 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Atxn1P54254 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Atxn1P54254 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Ank2-226ENSMUST00000189368 339 ntBASIC17.86■□□□□ 0.45
Atxn1P54254 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.86■□□□□ 0.45
Atxn1P54254 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Atxn1P54254 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Atxn1P54254 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.85■□□□□ 0.45
Atxn1P54254 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atxn1P54254 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.85■□□□□ 0.45
Atxn1P54254 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Atxn1P54254 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atxn1P54254 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atxn1P54254 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atxn1P54254 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Atxn1P54254 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.85■□□□□ 0.45
Atxn1P54254 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atxn1P54254 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atxn1P54254 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Atxn1P54254 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Atxn1P54254 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Atxn1P54254 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Atxn1P54254 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.84■□□□□ 0.45
Atxn1P54254 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Atxn1P54254 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Atxn1P54254 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn1P54254 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn1P54254 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn1P54254 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn1P54254 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms