Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-1P50220 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.98□□□□□ -0.01
Nkx2-1P50220 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Gm12821-201ENSMUST00000120022 600 ntBASIC14.98□□□□□ -0.01
Nkx2-1P50220 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-1P50220 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Spcs1-204ENSMUST00000226782 949 ntBASIC14.97□□□□□ -0.01
Nkx2-1P50220 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-1P50220 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.96□□□□□ -0.01
Nkx2-1P50220 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-1P50220 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-1P50220 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-1P50220 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-1P50220 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-1P50220 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-1P50220 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-1P50220 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Nkx2-1P50220 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.96□□□□□ -0.02
Nkx2-1P50220 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Nkx2-1P50220 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Gm8969-201ENSMUST00000199694 526 ntBASIC14.95□□□□□ -0.02
Nkx2-1P50220 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-1P50220 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-1P50220 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms