Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sox6P40645 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sox6P40645 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox6P40645 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox6P40645 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox6P40645 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox6P40645 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox6P40645 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sox6P40645 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox6P40645 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sox6P40645 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox6P40645 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sox6P40645 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sox6P40645 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sox6P40645 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sox6P40645 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox6P40645 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox6P40645 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox6P40645 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox6P40645 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox6P40645 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sox6P40645 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Sox6P40645 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox6P40645 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Sox6P40645 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Sox6P40645 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox6P40645 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox6P40645 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.95■□□□□ 0.3
Sox6P40645 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox6P40645 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sox6P40645 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox6P40645 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sox6P40645 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Sox6P40645 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.94■□□□□ 0.3
Sox6P40645 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.94■□□□□ 0.3
Sox6P40645 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sox6P40645 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.94■□□□□ 0.3
Sox6P40645 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sox6P40645 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox6P40645 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox6P40645 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox6P40645 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox6P40645 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sox6P40645 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox6P40645 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.93■□□□□ 0.3
Sox6P40645 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox6P40645 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox6P40645 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sox6P40645 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Fst-202ENSMUST00000223640 2612 ntBASIC16.92■□□□□ 0.3
Sox6P40645 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox6P40645 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.91■□□□□ 0.3
Sox6P40645 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sox6P40645 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.91■□□□□ 0.3
Sox6P40645 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.91■□□□□ 0.3
Sox6P40645 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.91■□□□□ 0.3
Sox6P40645 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox6P40645 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms