Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd9P40240 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cd9P40240 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd9P40240 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd9P40240 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.84■□□□□ 0.45
Cd9P40240 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.84■□□□□ 0.45
Cd9P40240 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cd9P40240 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Cd9P40240 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd9P40240 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd9P40240 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cd9P40240 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd9P40240 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd9P40240 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Cd9P40240 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd9P40240 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd9P40240 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.83■□□□□ 0.44
Cd9P40240 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cd9P40240 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Cd9P40240 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.83■□□□□ 0.44
Cd9P40240 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd9P40240 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd9P40240 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd9P40240 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd9P40240 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.83■□□□□ 0.44
Cd9P40240 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.82■□□□□ 0.44
Cd9P40240 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd9P40240 Idnk-204ENSMUST00000226010 1898 ntBASIC17.82■□□□□ 0.44
Cd9P40240 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd9P40240 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd9P40240 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd9P40240 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.81■□□□□ 0.44
Cd9P40240 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
Cd9P40240 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cd9P40240 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.81■□□□□ 0.44
Cd9P40240 Gm11927-201ENSMUST00000118472 759 ntBASIC17.81■□□□□ 0.44
Cd9P40240 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.81■□□□□ 0.44
Cd9P40240 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd9P40240 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd9P40240 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cd9P40240 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd9P40240 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.81■□□□□ 0.44
Cd9P40240 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Cd9P40240 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.81■□□□□ 0.44
Cd9P40240 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cd9P40240 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.8■□□□□ 0.44
Cd9P40240 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.8■□□□□ 0.44
Cd9P40240 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cd9P40240 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.8■□□□□ 0.44
Cd9P40240 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cd9P40240 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cd9P40240 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cd9P40240 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd9P40240 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.79■□□□□ 0.44
Cd9P40240 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.79■□□□□ 0.44
Cd9P40240 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.79■□□□□ 0.44
Cd9P40240 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.79■□□□□ 0.44
Cd9P40240 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Cd9P40240 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Rarb-207ENSMUST00000225921 2756 ntBASIC17.79■□□□□ 0.44
Cd9P40240 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.79■□□□□ 0.44
Cd9P40240 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd9P40240 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd9P40240 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms