Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.76□□□□□ -0.05
Timp3P39876 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.76□□□□□ -0.05
Timp3P39876 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.76□□□□□ -0.05
Timp3P39876 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.76□□□□□ -0.05
Timp3P39876 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Timp3P39876 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Timp3P39876 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Timp3P39876 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Timp3P39876 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Timp3P39876 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.75□□□□□ -0.05
Timp3P39876 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.75□□□□□ -0.05
Timp3P39876 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.75□□□□□ -0.05
Timp3P39876 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.75□□□□□ -0.05
Timp3P39876 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Timp3P39876 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Timp3P39876 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.74□□□□□ -0.05
Timp3P39876 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Timp3P39876 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.74□□□□□ -0.05
Timp3P39876 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Timp3P39876 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Timp3P39876 Dio3-201ENSMUST00000097228 1449 ntBASIC14.74□□□□□ -0.05
Timp3P39876 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Timp3P39876 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Timp3P39876 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.73□□□□□ -0.05
Timp3P39876 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.73□□□□□ -0.05
Timp3P39876 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Timp3P39876 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.73□□□□□ -0.05
Timp3P39876 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.73□□□□□ -0.05
Timp3P39876 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Timp3P39876 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Timp3P39876 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Timp3P39876 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
Timp3P39876 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.73□□□□□ -0.05
Timp3P39876 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Timp3P39876 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.72□□□□□ -0.05
Timp3P39876 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.72□□□□□ -0.05
Timp3P39876 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Timp3P39876 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Timp3P39876 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Timp3P39876 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Timp3P39876 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Timp3P39876 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms