Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.16■□□□□ 0.5
RxrbP28704 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RxrbP28704 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RxrbP28704 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RxrbP28704 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RxrbP28704 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.16■□□□□ 0.5
RxrbP28704 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RxrbP28704 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.15■□□□□ 0.5
RxrbP28704 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.15■□□□□ 0.5
RxrbP28704 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RxrbP28704 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RxrbP28704 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.15■□□□□ 0.5
RxrbP28704 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RxrbP28704 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.14■□□□□ 0.5
RxrbP28704 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.14■□□□□ 0.49
RxrbP28704 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.14■□□□□ 0.49
RxrbP28704 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RxrbP28704 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RxrbP28704 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RxrbP28704 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.13■□□□□ 0.49
RxrbP28704 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RxrbP28704 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
RxrbP28704 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RxrbP28704 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.13■□□□□ 0.49
RxrbP28704 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RxrbP28704 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.12■□□□□ 0.49
RxrbP28704 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RxrbP28704 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
RxrbP28704 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.12■□□□□ 0.49
RxrbP28704 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RxrbP28704 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RxrbP28704 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RxrbP28704 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RxrbP28704 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RxrbP28704 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RxrbP28704 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RxrbP28704 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.11■□□□□ 0.49
RxrbP28704 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.11■□□□□ 0.49
RxrbP28704 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RxrbP28704 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.11■□□□□ 0.49
RxrbP28704 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RxrbP28704 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RxrbP28704 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RxrbP28704 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.1■□□□□ 0.49
RxrbP28704 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.1■□□□□ 0.49
RxrbP28704 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RxrbP28704 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.1■□□□□ 0.49
RxrbP28704 Gm45417-201ENSMUST00000209533 758 ntBASIC18.1■□□□□ 0.49
RxrbP28704 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RxrbP28704 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms