Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Nckap1P28660 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.96■□□□□ 0.47
Nckap1P28660 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nckap1P28660 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.96■□□□□ 0.47
Nckap1P28660 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nckap1P28660 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nckap1P28660 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nckap1P28660 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nckap1P28660 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nckap1P28660 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nckap1P28660 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nckap1P28660 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nckap1P28660 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.95■□□□□ 0.46
Nckap1P28660 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nckap1P28660 Gm18025-201ENSMUST00000221733 862 ntBASIC17.95■□□□□ 0.46
Nckap1P28660 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nckap1P28660 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nckap1P28660 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nckap1P28660 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Nckap1P28660 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nckap1P28660 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Nckap1P28660 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nckap1P28660 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nckap1P28660 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nckap1P28660 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nckap1P28660 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nckap1P28660 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nckap1P28660 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nckap1P28660 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nckap1P28660 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nckap1P28660 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nckap1P28660 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.94■□□□□ 0.46
Nckap1P28660 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.94■□□□□ 0.46
Nckap1P28660 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Nckap1P28660 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nckap1P28660 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nckap1P28660 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Nckap1P28660 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nckap1P28660 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.94■□□□□ 0.46
Nckap1P28660 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.94■□□□□ 0.46
Nckap1P28660 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nckap1P28660 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.93■□□□□ 0.46
Nckap1P28660 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nckap1P28660 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.93■□□□□ 0.46
Nckap1P28660 Gm15565-201ENSMUST00000118890 427 ntBASIC17.93■□□□□ 0.46
Nckap1P28660 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Nckap1P28660 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.93■□□□□ 0.46
Nckap1P28660 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nckap1P28660 Mir6349-201ENSMUST00000184059 97 ntBASIC17.93■□□□□ 0.46
Nckap1P28660 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Nckap1P28660 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.93■□□□□ 0.46
Nckap1P28660 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nckap1P28660 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nckap1P28660 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Nckap1P28660 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nckap1P28660 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Nckap1P28660 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nckap1P28660 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nckap1P28660 Mir5122-201ENSMUST00000175004 89 ntBASIC17.92■□□□□ 0.46
Nckap1P28660 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nckap1P28660 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.92■□□□□ 0.46
Nckap1P28660 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.92■□□□□ 0.46
Nckap1P28660 Gm42545-201ENSMUST00000202755 922 ntBASIC17.92■□□□□ 0.46
Nckap1P28660 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nckap1P28660 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.92■□□□□ 0.46
Nckap1P28660 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nckap1P28660 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nckap1P28660 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nckap1P28660 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nckap1P28660 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nckap1P28660 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nckap1P28660 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nckap1P28660 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Nckap1P28660 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nckap1P28660 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nckap1P28660 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.91■□□□□ 0.46
Nckap1P28660 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nckap1P28660 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.91■□□□□ 0.46
Nckap1P28660 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nckap1P28660 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nckap1P28660 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nckap1P28660 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nckap1P28660 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nckap1P28660 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nckap1P28660 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nckap1P28660 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nckap1P28660 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nckap1P28660 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms