Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf9P20334 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf9P20334 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf9P20334 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Gm10698-201ENSMUST00000182663 604 ntBASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Gm9987-201ENSMUST00000069768 567 ntBASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf9P20334 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.62□□□□□ -0.07
Tnfrsf9P20334 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Dio3-201ENSMUST00000097228 1449 ntBASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Tnfrsf9P20334 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf9P20334 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf9P20334 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf9P20334 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tnfrsf9P20334 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf9P20334 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Tnfrsf9P20334 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms