Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn1P18608 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn1P18608 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Hmgn1P18608 Gm26833-201ENSMUST00000180899 440 ntBASIC16.55■□□□□ 0.24
Hmgn1P18608 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Hmgn1P18608 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hmgn1P18608 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hmgn1P18608 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hmgn1P18608 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn1P18608 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hmgn1P18608 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn1P18608 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn1P18608 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn1P18608 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.55■□□□□ 0.24
Hmgn1P18608 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn1P18608 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgn1P18608 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hmgn1P18608 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Hmgn1P18608 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hmgn1P18608 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Hmgn1P18608 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Gm21956-201ENSMUST00000179946 522 ntBASIC16.54■□□□□ 0.24
Hmgn1P18608 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Hmgn1P18608 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.54■□□□□ 0.24
Hmgn1P18608 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Hmgn1P18608 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.54■□□□□ 0.24
Hmgn1P18608 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Hmgn1P18608 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.54■□□□□ 0.24
Hmgn1P18608 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgn1P18608 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.54■□□□□ 0.24
Hmgn1P18608 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.53■□□□□ 0.24
Hmgn1P18608 Gm40848-201ENSMUST00000221998 324 ntBASIC16.53■□□□□ 0.24
Hmgn1P18608 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hmgn1P18608 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgn1P18608 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgn1P18608 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgn1P18608 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgn1P18608 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgn1P18608 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgn1P18608 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgn1P18608 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgn1P18608 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Hmgn1P18608 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgn1P18608 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.52■□□□□ 0.24
Hmgn1P18608 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.52■□□□□ 0.24
Hmgn1P18608 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgn1P18608 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgn1P18608 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgn1P18608 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Hmgn1P18608 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.51■□□□□ 0.23
Hmgn1P18608 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.51■□□□□ 0.23
Hmgn1P18608 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Hmgn1P18608 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgn1P18608 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms