Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc6P10629 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc6P10629 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.11■□□□□ 0.81
Hoxc6P10629 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc6P10629 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.11■□□□□ 0.81
Hoxc6P10629 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Hoxc6P10629 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc6P10629 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxc6P10629 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Hoxc6P10629 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.1■□□□□ 0.81
Hoxc6P10629 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.1■□□□□ 0.81
Hoxc6P10629 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxc6P10629 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc6P10629 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc6P10629 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Hoxc6P10629 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc6P10629 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.09■□□□□ 0.81
Hoxc6P10629 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc6P10629 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.09■□□□□ 0.81
Hoxc6P10629 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.09■□□□□ 0.81
Hoxc6P10629 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc6P10629 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Hoxc6P10629 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc6P10629 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxc6P10629 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.08■□□□□ 0.81
Hoxc6P10629 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc6P10629 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Hoxc6P10629 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc6P10629 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc6P10629 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc6P10629 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.08■□□□□ 0.81
Hoxc6P10629 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc6P10629 Gm6345-202ENSMUST00000180900 204 ntBASIC20.08■□□□□ 0.81
Hoxc6P10629 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.08■□□□□ 0.81
Hoxc6P10629 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxc6P10629 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxc6P10629 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hoxc6P10629 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc6P10629 AA414768-201ENSMUST00000121924 1257 ntBASIC20.07■□□□□ 0.8
Hoxc6P10629 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Hoxc6P10629 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc6P10629 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hoxc6P10629 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
Hoxc6P10629 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.06■□□□□ 0.8
Hoxc6P10629 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 Gm38027-201ENSMUST00000192315 235 ntBASIC20.06■□□□□ 0.8
Hoxc6P10629 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.06■□□□□ 0.8
Hoxc6P10629 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hoxc6P10629 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hoxc6P10629 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hoxc6P10629 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxc6P10629 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Hoxc6P10629 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc6P10629 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc6P10629 Gm12085-201ENSMUST00000119263 940 ntBASIC20.05■□□□□ 0.8
Hoxc6P10629 Gm10517-202ENSMUST00000192970 758 ntBASIC20.05■□□□□ 0.8
Hoxc6P10629 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.05■□□□□ 0.8
Hoxc6P10629 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Hoxc6P10629 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc6P10629 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc6P10629 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc6P10629 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc6P10629 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxc6P10629 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Gm33142-201ENSMUST00000193913 867 ntBASIC20.04■□□□□ 0.8
Hoxc6P10629 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hoxc6P10629 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxc6P10629 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc6P10629 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc6P10629 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxc6P10629 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms