Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc8P09025 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc8P09025 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hoxc8P09025 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc8P09025 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Hoxc8P09025 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Hoxc8P09025 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc8P09025 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.36■□□□□ 0.69
Hoxc8P09025 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc8P09025 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc8P09025 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Hoxc8P09025 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc8P09025 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hoxc8P09025 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Hoxc8P09025 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.35■□□□□ 0.69
Hoxc8P09025 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.35■□□□□ 0.69
Hoxc8P09025 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hoxc8P09025 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Tgds-204ENSMUST00000228543 1594 ntBASIC19.35■□□□□ 0.69
Hoxc8P09025 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc8P09025 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Hoxc8P09025 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc8P09025 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.34■□□□□ 0.69
Hoxc8P09025 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc8P09025 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc8P09025 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc8P09025 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc8P09025 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc8P09025 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc8P09025 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Hoxc8P09025 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc8P09025 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.34■□□□□ 0.69
Hoxc8P09025 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc8P09025 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc8P09025 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.33■□□□□ 0.69
Hoxc8P09025 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxc8P09025 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxc8P09025 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxc8P09025 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.33■□□□□ 0.69
Hoxc8P09025 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.33■□□□□ 0.68
Hoxc8P09025 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.33■□□□□ 0.68
Hoxc8P09025 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc8P09025 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.33■□□□□ 0.68
Hoxc8P09025 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.33■□□□□ 0.68
Hoxc8P09025 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Hoxc8P09025 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc8P09025 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Hoxc8P09025 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxc8P09025 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hoxc8P09025 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hoxc8P09025 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc8P09025 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc8P09025 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc8P09025 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.32■□□□□ 0.68
Hoxc8P09025 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hoxc8P09025 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc8P09025 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxc8P09025 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hoxc8P09025 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hoxc8P09025 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.32■□□□□ 0.68
Hoxc8P09025 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.32■□□□□ 0.68
Hoxc8P09025 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc8P09025 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc8P09025 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.31■□□□□ 0.68
Hoxc8P09025 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc8P09025 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.31■□□□□ 0.68
Hoxc8P09025 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc8P09025 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxc8P09025 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxc8P09025 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxc8P09025 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxc8P09025 Gm10013-201ENSMUST00000106074 672 ntBASIC19.3■□□□□ 0.68
Hoxc8P09025 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxc8P09025 Gm13401-201ENSMUST00000117074 291 ntBASIC19.3■□□□□ 0.68
Hoxc8P09025 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxc8P09025 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.3■□□□□ 0.68
Hoxc8P09025 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxc8P09025 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxc8P09025 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxc8P09025 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxc8P09025 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hoxc8P09025 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxc8P09025 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxc8P09025 Gm10418-201ENSMUST00000100943 576 ntBASIC19.29■□□□□ 0.68
Hoxc8P09025 Gm23634-201ENSMUST00000175071 91 ntBASIC19.29■□□□□ 0.68
Hoxc8P09025 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.29■□□□□ 0.68
Hoxc8P09025 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hoxc8P09025 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxc8P09025 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms