Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm37292-201ENSMUST00000192062 758 ntBASIC19.19■□□□□ 0.66
TnfP06804 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TnfP06804 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TnfP06804 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TnfP06804 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TnfP06804 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TnfP06804 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TnfP06804 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TnfP06804 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TnfP06804 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TnfP06804 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TnfP06804 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.18■□□□□ 0.66
TnfP06804 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.18■□□□□ 0.66
TnfP06804 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.18■□□□□ 0.66
TnfP06804 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TnfP06804 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TnfP06804 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TnfP06804 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.18■□□□□ 0.66
TnfP06804 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.18■□□□□ 0.66
TnfP06804 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TnfP06804 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.18■□□□□ 0.66
TnfP06804 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TnfP06804 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TnfP06804 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TnfP06804 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.17■□□□□ 0.66
TnfP06804 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TnfP06804 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TnfP06804 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TnfP06804 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TnfP06804 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TnfP06804 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TnfP06804 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TnfP06804 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TnfP06804 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TnfP06804 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TnfP06804 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TnfP06804 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TnfP06804 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Mir7071-201ENSMUST00000184847 69 ntBASIC19.16■□□□□ 0.66
TnfP06804 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.16■□□□□ 0.66
TnfP06804 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TnfP06804 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.16■□□□□ 0.66
TnfP06804 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TnfP06804 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TnfP06804 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TnfP06804 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TnfP06804 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TnfP06804 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.15■□□□□ 0.66
TnfP06804 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TnfP06804 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TnfP06804 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TnfP06804 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TnfP06804 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TnfP06804 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TnfP06804 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TnfP06804 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.66
TnfP06804 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.14■□□□□ 0.66
TnfP06804 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
TnfP06804 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.14■□□□□ 0.66
TnfP06804 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
TnfP06804 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TnfP06804 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TnfP06804 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TnfP06804 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TnfP06804 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.14■□□□□ 0.65
TnfP06804 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TnfP06804 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.14■□□□□ 0.65
TnfP06804 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TnfP06804 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TnfP06804 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TnfP06804 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TnfP06804 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TnfP06804 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TnfP06804 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TnfP06804 Gm12382-201ENSMUST00000122005 922 ntBASIC19.13■□□□□ 0.65
TnfP06804 Gm37055-201ENSMUST00000191866 133 ntBASIC19.13■□□□□ 0.65
TnfP06804 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TnfP06804 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TnfP06804 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TnfP06804 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TnfP06804 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TnfP06804 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TnfP06804 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TnfP06804 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.12■□□□□ 0.65
TnfP06804 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TnfP06804 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TnfP06804 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TnfP06804 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TnfP06804 Mir2861-201ENSMUST00000175539 82 ntBASIC19.12■□□□□ 0.65
TnfP06804 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms