Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa4P06798 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa4P06798 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa4P06798 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa4P06798 Gm15378-201ENSMUST00000121894 207 ntBASIC17.78■□□□□ 0.44
Hoxa4P06798 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa4P06798 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa4P06798 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.78■□□□□ 0.44
Hoxa4P06798 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa4P06798 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hoxa4P06798 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa4P06798 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa4P06798 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Hoxa4P06798 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa4P06798 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa4P06798 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.77■□□□□ 0.44
Hoxa4P06798 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa4P06798 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa4P06798 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.77■□□□□ 0.44
Hoxa4P06798 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.77■□□□□ 0.44
Hoxa4P06798 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.77■□□□□ 0.44
Hoxa4P06798 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa4P06798 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.77■□□□□ 0.44
Hoxa4P06798 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa4P06798 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa4P06798 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Hoxa4P06798 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hoxa4P06798 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.77■□□□□ 0.43
Hoxa4P06798 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.77■□□□□ 0.43
Hoxa4P06798 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa4P06798 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxa4P06798 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa4P06798 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxa4P06798 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa4P06798 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxa4P06798 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.76■□□□□ 0.43
Hoxa4P06798 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
Hoxa4P06798 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.76■□□□□ 0.43
Hoxa4P06798 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.76■□□□□ 0.43
Hoxa4P06798 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa4P06798 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa4P06798 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa4P06798 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa4P06798 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hoxa4P06798 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.75■□□□□ 0.43
Hoxa4P06798 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hoxa4P06798 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.75■□□□□ 0.43
Hoxa4P06798 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Hoxa4P06798 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Hoxa4P06798 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxa4P06798 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hoxa4P06798 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Hoxa4P06798 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.74■□□□□ 0.43
Hoxa4P06798 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Gm10418-201ENSMUST00000100943 576 ntBASIC17.74■□□□□ 0.43
Hoxa4P06798 Gm11643-201ENSMUST00000119578 864 ntBASIC17.74■□□□□ 0.43
Hoxa4P06798 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Hoxa4P06798 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Gm10698-201ENSMUST00000182663 604 ntBASIC17.74■□□□□ 0.43
Hoxa4P06798 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.74■□□□□ 0.43
Hoxa4P06798 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxa4P06798 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Hoxa4P06798 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa4P06798 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.73■□□□□ 0.43
Hoxa4P06798 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.73■□□□□ 0.43
Hoxa4P06798 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa4P06798 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hoxa4P06798 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa4P06798 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.73■□□□□ 0.43
Hoxa4P06798 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.73■□□□□ 0.43
Hoxa4P06798 Gm18025-201ENSMUST00000221733 862 ntBASIC17.73■□□□□ 0.43
Hoxa4P06798 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa4P06798 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxa4P06798 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa4P06798 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa4P06798 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa4P06798 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxa4P06798 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms